- o -

• observer : test::T150_PyMOL_Integration
• off_rotamer_pack : basic::options::OptionKeys
• ofs : assign_charges
• ok : clean_pdb_keep_ligand
• old_phi : test::T850_SubClassing
• oldresnum : clean_pdb_keep_ligand , toolbox::make_rna_rosetta_ready
• omega_start_val : mrlo
• one : numeric::constants::d , numeric::constants::f , numeric::constants::ld , numeric::constants::r
• one_letter_names : amino_acids
• oop_design_positions : oop_design
• option : basic::options
• Options : options
• options : utility::options::OptionKeys::options
• opts : app::surface_docking::surface_docking
• outDIR : app::pyrosetta_toolkit::modules::SQLPDB
• outdir : test::G203_Module_SQLPDB
• outer_cycles : loops , loops_kic , test::T650_LoopsKIC
• outer_cycles_high : demo::D080_Loop_modeling
• outer_cycles_low : demo::D080_Loop_modeling
• outfile : clean_pdb_keep_ligand , make_static_database , toolbox::make_rna_rosetta_ready
• outid : clean_pdb_keep_ligand , toolbox::make_rna_rosetta_ready
• output : contacts , demo::D090_Ala_scan , make_static_database , test::Workshop7test , test::Workshop8test
• output_clean_pdb : loadPDB
• output_mutant_structures : protocols::pmut_scan
• OZSTREAM_DEFAULT_BUFFER_SIZE : utility::io