- c -

• CA_MODEL : clean_pdb_keep_ligand
• CA_xyz : test::Workshop2test
• calls : basic
• candidate_target_library : BuildPackagedBindings
• candidate_target_modules : BuildPackagedBindings
• ccd : test::Workshop8test
• ccd_closure : loops
• cdrs : test::G201_Module_Structure
• cen_relax : app::surface_docking::surface_docking
• cerr : utility::io::oc
• chainid : clean_pdb_keep_ligand
• chainids : toolbox::make_rna_rosetta_ready
• chat : basic::options
• chm : test::T100_Basic
• cin : utility::io::ic
• circle : test::Workshop9test
• circle2 : test::Workshop9test
• classifiers : app::pyrosetta_toolkit::modules::prettytable::setup
• clock_factor : basic
• clog : utility::io::oc
• cmd : PlotSurfaceContactMap
• COLOR_LIB : PyMOLPyRosettaServer
• colors : test::T150_PyMOL_Integration
• combined_pose : app::surface_docking::surface_docking
• compare_residue_energies_all : local
• compare_residue_energies_mut : local
• Con : ContactMap
• config : src
• config_file_name : src
• constraints : app::surface_docking::surface_docking
• contactAtoms : calccontacts
• contactFilter : calccontacts
• contactObject : contacts
• contactType : calccontacts
• context : tools::CppParser
• count : clean_pdb_keep_ligand , toolbox::make_rna_rosetta_ready
• counter : demo::D060_Folding , demo::D100_Docking , demo::D110_DNA_interface , demo::D120_Ligand_interface
• cout : utility::io::oc
• CSI_bgBlack : utility
• CSI_bgBlue : utility
• CSI_bgCyan : utility
• CSI_bgGreen : utility
• CSI_bgMagenta : utility
• CSI_bgRed : utility
• CSI_bgWhite : utility
• CSI_bgYellow : utility
• CSI_Black : utility
• CSI_Blue : utility
• CSI_Bold : utility
• CSI_Cyan : utility
• CSI_Green : utility
• CSI_Magenta : utility
• CSI_Red : utility
• CSI_Reset : utility
• CSI_Underline : utility
• CSI_White : utility
• CSI_Yellow : utility
• cst_file : test::G100_Functions_Input
• CubeSyms : basic::sampling::orientations
• curr_ads : app::surface_docking::surface_docking
• curr_sol : app::surface_docking::surface_docking
• current_directory : app::pyrosetta_toolkit::window_main::global_variables
• current_lib_suffix : BuildPackagedBindings
• current_platform : BuildPackagedBindings
• current_platform_bits : BuildPackagedBindings
• cutpoint : loops
• cwd1 : app::surface_docking::surface_docking
• cwd2 : app::surface_docking::surface_docking
• cwdn : app::surface_docking::surface_docking
• cycles : demo::D060_Folding , demo::D070_Refinement
• cyclic : peptoid_design