Here is a list of all file members with links to the files they belong to:

- a -

• aa2index() : pepspec.cc
• add_all_rosetta_options() : option.cc.gen.hh
• add_pep_res() : pepspec.cc
• add_regular_scores_to_scorefile : InterfaceAnalyzer.cc
• add_rosetta_options_0() : option.cc.gen.hh
• add_rosetta_options_1() : option.cc.gen.hh
• add_rosetta_options_10() : option.cc.gen.hh
• add_rosetta_options_11() : option.cc.gen.hh
• add_rosetta_options_12() : option.cc.gen.hh
• add_rosetta_options_13() : option.cc.gen.hh
• add_rosetta_options_14() : option.cc.gen.hh
• add_rosetta_options_15() : option.cc.gen.hh
• add_rosetta_options_2() : option.cc.gen.hh
• add_rosetta_options_3() : option.cc.gen.hh
• add_rosetta_options_4() : option.cc.gen.hh
• add_rosetta_options_5() : option.cc.gen.hh
• add_rosetta_options_6() : option.cc.gen.hh
• add_rosetta_options_7() : option.cc.gen.hh
• add_rosetta_options_8() : option.cc.gen.hh
• add_rosetta_options_9() : option.cc.gen.hh
• add_termini() : pepspec.cc
• add_to_list() : _utility__by_hand_beginning.cc
• add_to_set() : _core__by_hand_beginning.cc , _utility__by_hand_beginning.cc
• align_pdbs() : swa_rna_util.cc
• align_pose_general() : swa_rna_util.cc
• all_pair_energies() : per_residue_energies.cc
• already_minimized() : minimize_with_cst.cc
• AnchorFinderMoverOP : AnchorFinder.cc
• angle_rotation_increment : zinc2_homodimer_setup.cc
• APDBCMoverOP : AnchoredPDBCreator.cc
• ASSERT_ONLY : assert.hh
• assure() : gen_apo_grids.cc , gen_lig_grids.cc , gen_apo_grids.cc , gen_lig_grids.cc
• atom1_vector() : extract_motifs.cc
• atom2_vector() : extract_motifs.cc
• atom3_vector() : extract_motifs.cc
• average() : ddg_benchmark.cc , pepspec_anchor_dock.cc
• average_score_components() : ddg_benchmark.cc
• axis : zinc2_homodimer_setup.cc , zinc1_homodimer_design.cc , zinc1_homodimer_setup.cc , zinc2_homodimer_design.cc