Here is a list of all namespace members with links to the namespace documentation for each member:

- r -

• r1 : test::Workshop3test
• r2 : test::Workshop3test
• R5C : test::Workshop2test
• R5CA : test::Workshop2test
• R5N : test::Workshop2test
• rad2deg : numeric::constants::d , numeric::constants::f , numeric::constants::ld , numeric::constants::r
• RADIANS : numeric::conversions
• radians() : numeric::conversions
• radians_to_degrees : numeric::constants::d , numeric::constants::f , numeric::constants::ld , numeric::constants::r
• rand_sleep() : utility
• RANDOM : app::pyrosetta_toolkit::modules::prettytable::prettytable
• random_generator() : numeric::random
• random_move() : test::Workshop4test
• random_normal() : numeric::random
• random_permutation() : numeric::random
• random_point_on_unit_sphere() : numeric::random
• random_range() : numeric::random
• random_rotation() : numeric::random
• random_rotation_angle() : numeric::random
• random_sequence() : toolbox::mutants
• random_translation() : numeric::random
• random_unit_quaternion() : numeric::random
• random_vector() : numeric::random
• random_vector_spherical() : numeric::random
• random_vector_unit_cube() : numeric::random
• random_xform() : numeric::random
• RandomGeneratorOP : numeric::random
• randomize1 : docking , test::Workshop7test
• randomize2 : docking , test::Workshop7test
• Rargs : app::surface_docking::surface_docking
• ras : test::Workshop3test , test::Workshop4test
• raw_utf8 : utility::json_spirit
• read() : ObjexxFCL , utility::json_spirit
• read_binary() : ObjexxFCL
• read_input_list() : arls_impl
• read_mArray() : utility::json_spirit
• read_metric_value() : basic
• read_metric_value_scalar() : basic
• read_metric_value_template() : basic
• read_metric_value_vector1() : basic
• read_mObject() : utility::json_spirit
• read_or_throw() : utility::json_spirit
• read_probabilities_or_die() : numeric
• read_range() : utility::json_spirit
• read_range_or_throw() : utility::json_spirit
• read_row() : numeric
• read_stream() : utility::json_spirit
• read_stream_or_throw() : utility::json_spirit
• read_string() : utility::json_spirit
• read_string_or_throw() : utility::json_spirit
• read_vector() : utility::io
• readFASC() : app::pyrosetta_toolkit::modules::tools::analysis
• ReadFromFileOrDie() : utility
• readsome() : ObjexxFCL
• Real : numeric , platform
• real2afteroption() : basic::options
• Real3 : numeric::geometry::hashing
• real3afteroption() : basic::options
• Real6 : numeric::geometry::hashing
• real_type : utility::json_spirit
• realafteroption() : basic::options
• REALLY_BIG_DISTANCE() : numeric::kdtree
• RealOption : basic::options
• RealOptionKey : basic::options
• RealVectorOption : basic::options
• RealVectorOptionKey : basic::options
• receive_char_from_node() : utility
• receive_double_from_node() : utility
• receive_doubles_from_node() : utility
• receive_integer_from_anyone() : utility
• receive_integer_from_node() : utility
• receive_integers_from_node() : utility
• RECEIVE_MESSAGE_TAG : basic::mpi
• receive_string_from_node() : utility
• recover_side_chain_mover : test::T600_Docking
• recover_sidechains : docking , loops , loops_kic , test::T650_LoopsKIC , test::Workshop7test
• redesign_pdb_list : sequence_recovery
• refChain : calccontacts
• reference_pose : test::Workshop8test
• ReferenceCountCOP : utility::pointer
• ReferenceCountOP : utility::pointer
• refweight_arg : local
• refweight_asp : local
• refweight_glu : local
• refweight_lys : local
• reg : test::G200_Module_Region
• reg_score : test::G205_Module_RegionalScoring
• regexs : ObjexxFCL
• region : test::G102_Functions_General
• region2 : test::G200_Module_Region
• region_selection() : app::pyrosetta_toolkit::modules::help
• regions : test::G101_Functions_Output , test::G102_Functions_General
• register_version_with_core() : devel
• regs : test::G200_Module_Region
• rel : test::G200_Module_Region
• relax : test::T800_ClassicRelax , test::Workshop5test
• relax_p : test::T800_ClassicRelax
• RELERROR : numeric::kinematic_closure
• remainder() : numeric , ObjexxFCL
• remainder_conversion() : numeric , ObjexxFCL
• remove_exit_callback() : utility
• remove_option_from_map() : basic::resource_manager
• remove_tracer_default_args_and_vars() : exclude
• remove_trailing() : utility::json_spirit
• remove_trailing_zeros : utility::json_spirit
• removechain : clean_pdb_keep_ligand , toolbox::make_rna_rosetta_ready
• RemoveListItem() : app::pyrosetta_toolkit::window_modules::protocol_builder::ProtocolBuilder
• removeProtectedConstructos() : exclude
• renameandsave() : app::pyrosetta_toolkit::modules::tools::general_tools
• repack_fragments : usec
• repeat() : ObjexxFCL::format
• repeat_mover : test::Workshop5test
• replace_environment_variables() : utility
• replace_in() : utility
• replace_init() : src
• replace_spaces() : utility
• request_data_from_head_node() : basic::mpi
• REQUEST_MESSAGE_TAG : basic::mpi
• res : app::delta_score_per_mutation
• res5 : test::T100_Basic
• res_set : test::T880_Other
• rescale_cartesian() : PyMOLPyRosettaServer
• rescore_single_pdb() : app::pyrosetta_toolkit::modules::tools::output
• reservoir_sample() : numeric::random
• reservoir_sample_accept_prob() : numeric::random
• reset_chain() : loadPDB
• resetChain() : loadPDB
• resetlists() : PDBInfo
• residual_squared_of_points_to_plane() : numeric::geometry
• residue_1 : test::T220_AtomAtomPairEnergies
• residue_2 : test::T220_AtomAtomPairEnergies
• residue_buffer : clean_pdb_keep_ligand
• residue_invalid : clean_pdb_keep_ligand
• residue_letter : clean_pdb_keep_ligand
• residue_name : usec
• ResidueChainVectorOptionKey : basic::options
• ResidueList() : PDBInfo
• residues : demo::D010_Pose_structure , demo::D020_Pose_scoring
• resnum : clean_pdb_keep_ligand , toolbox::make_rna_rosetta_ready
• resolve_build_version() : setup
• resolve_context_and_name() : tools::CppParser
• resolve_db_partition() : basic::database
• Resource : basic::resource_manager
• ResourceDescription : basic::resource_manager
• ResourceLoaderCOP : basic::resource_manager
• ResourceLoaderCreatorCOP : basic::resource_manager
• ResourceLoaderCreatorOP : basic::resource_manager
• ResourceLoaderOP : basic::resource_manager
• ResourceLocatorCOP : basic::resource_manager
• ResourceLocatorCreatorCOP : basic::resource_manager
• ResourceLocatorCreatorOP : basic::resource_manager
• ResourceLocatorOP : basic::resource_manager
• ResourceManagerCOP : basic::resource_manager
• ResourceManagerCreatorCOP : basic::resource_manager
• ResourceManagerCreatorOP : basic::resource_manager
• ResourceManagerOP : basic::resource_manager
• ResourceOP : basic::resource_manager
• ResourceOptionsCOP : basic::resource_manager
• ResourceOptionsCreatorCOP : basic::resource_manager
• ResourceOptionsCreatorOP : basic::resource_manager
• ResourceOptionsOP : basic::resource_manager
• ResourceOptionsTag : basic::resource_manager
• ResourceStreamCOP : basic::resource_manager
• ResourceStreamOP : basic::resource_manager
• ResourceTag : basic::resource_manager
• restrict_non_nbrs_from_repacking() : app::pyrosetta_toolkit::modules::protocols::DesignProtocols
• restriction_type_name() : utility::tag
• restypedict : loadPDB
• return_energy() : app::pyrosetta_toolkit::modules::tools::analysis
• return_probability() : app::pyrosetta_toolkit::modules::tools::analysis
• return_residue_array() : app::pyrosetta_toolkit::modules::tools::loops
• return_rosetta_Loop() : app::pyrosetta_toolkit::modules::tools::loops
• RG : basic
• rg() : numeric::random
• RG_LOCAL : basic
• rgb_to_hsv() : numeric
• rgg() : numeric::linear_algebra
• right_Fstring_of() : ObjexxFCL
• right_justified() : ObjexxFCL
• right_justify() : ObjexxFCL
• RIGHT_PAREN : numeric::expression_parser
• right_string_of() : ObjexxFCL
• RJ() : ObjexxFCL::format
• rjust() : ObjexxFCL
• rms : loops_kic , test::T650_LoopsKIC
• rms_wrapper() : numeric::model_quality
• rms_wrapper_slow_and_correct() : numeric::model_quality
• rmsd() : app::pyrosetta_toolkit::modules::tools::analysis
• rmsfitca2() : numeric::model_quality
• rmsfitca3() : numeric::model_quality
• RocCurveOP : numeric
• RocPointOP : numeric
• RocStatus : numeric
• roll : test::Workshop4test
• root : app::pyrosetta_toolkit::window_modules::interactive_terminal::interactive_terminal
• rosetta_database_from_env() : src::initialization , src
• rot_lib_options_file : mrlo
• rot_z1 : make_symmdef_file_denovo
• rot_z2 : make_symmdef_file_denovo
• rotamer_recovery : sequence_recovery
• ROTAMER_TRIALS : basic
• rotamer_trials : test::T500_Packing
• rotate_vector() : PyMOLPyRosettaServer
• rotateX() : numeric::kinematic_closure::radians , numeric::kinematic_closure
• rotateY() : numeric::kinematic_closure::radians , numeric::kinematic_closure
• rotateZ() : numeric::kinematic_closure::radians , numeric::kinematic_closure
• rotation : demo::D100_Docking
• rotation_angle() : numeric
• rotation_axis() : numeric
• rotation_axis_angle() : numeric
• rotation_matrix() : numeric
• rotation_matrix_degrees() : numeric
• rotation_matrix_radians() : numeric , PyMOLPyRosettaServer
• rotation_z : make_symmdef_file_denovo
• rotation_z2 : make_symmdef_file_denovo
• round() : utility
• RowDataBaseOP : basic::database::insert_statement_generator
• rpad() : ObjexxFCL
• rpadded() : ObjexxFCL
• rsd1 : test::T200_Scoring , test::Workshop3test
• rsd1_num : test::Workshop3test
• rsd2 : test::T200_Scoring , test::Workshop3test
• rsd2_num : test::Workshop3test
• rss() : coordlib
• rstrip() : ObjexxFCL
• rstrip_whitespace() : ObjexxFCL
• rstripped() : ObjexxFCL
• rstripped_whitespace() : ObjexxFCL
• rsym_eigenval() : numeric::model_quality
• rsym_evector() : numeric::model_quality
• rsym_rotation() : numeric::model_quality
• rts : test::T100_Basic
• run() : app::surface_docking::surface_docking
• run_test() : TestBindings
• rvalue_cast() : ObjexxFCL