Here is a list of all namespace members with links to the namespace documentation for each member:

- m -

• M : test::T007_TracerIO
• main() : app::pyrosetta_toolkit::modules::prettytable::prettytable , app::pyrosetta_toolkit::window_modules::ligand_ncaa_ptm_manager::ligand_ncaa_ptm_manager , app::pyrosetta_toolkit::window_modules::options_system::OptionSystemManager , arls_impl , best_ifaceE , BuildBindings , BuildPackagedBindings , compare_times , get_scores , make_amb_constr , make_templates , mp_ddG , ObjexxFCL , options , pdb_to_molfile
• MAIN() : PhiPsi , PlotSurfaceContactMap
• main() : predict_ddG , prune_atdiff_top5pct , PyMOLPyRosettaServer , sidechain_cst_3 , TestBindings , tools::CppParser
• main_exit_callback : utility
• main_window_class : app::pyrosetta_toolkit::pyrosetta_toolkit , test::G000_Main_GUI
• MAJOR : setup
• make_ads_disulf() : app::surface_docking::constraints
• make_axis() : PyMOLPyRosettaServer
• MAKE_BASE_PAIR_MOVE : basic
• MAKE_BASE_STEP_MOVE : basic
• make_compound_statement() : basic::database
• make_data() : PyMOLPyRosettaServer
• make_implicitly_convertible() : exclude
• make_map() : utility::tools
• make_nonvirtual() : exclude
• make_PDBLIST() : app::pyrosetta_toolkit::modules::tools::output
• make_PDBLIST_recursively() : app::pyrosetta_toolkit::modules::tools::output
• make_plane_from_three_points() : numeric::geometry
• make_points() : numeric::kdtree
• make_segtag_with_dashes() : utility
• MAKE_SURE_IS_COPYABLE : exclude
• make_sure_is_copyable() : exclude
• make_tag() : utility
• make_tag_with_dashes() : utility
• make_vector() : utility::tools
• make_vector1() : utility::tools
• makeContactMap() : calccontacts
• makeContactPDB() : calccontacts
• makeContactProfile() : calccontacts
• makeFile() : make_templates
• makeShellProfile() : calccontacts
• makeVector() : coordlib
• MakeVector() : numeric
• manager : app::pyrosetta_toolkit::window_modules::ligand_ncaa_ptm_manager::ligand_ncaa_ptm_manager
• map_to_obj() : utility::json_spirit
• Mapped_obj : utility::json_spirit
• mArray : utility::json_spirit
• MASTER_PROCESS_NEW_STRUCTURES : basic
• match_pdb : local
• Matrix16 : numeric::kinematic_closure
• Matrix8 : numeric::kinematic_closure
• MatrixMult() : numeric::model_quality
• max() : numeric , ObjexxFCL , utility
• MAX_ITER_SECANT : numeric::kinematic_closure
• MAX_KIC_BUILD_ATTEMPTS : loops_kic , test::T650_LoopsKIC
• max_model : toolbox::make_rna_rosetta_ready
• MaxExpressionCOP : numeric::expression_parser
• MaxExpressionOP : numeric::expression_parser
• MAXIT : numeric::kinematic_closure
• maxsub() : numeric::model_quality
• mb_exclude() : exclude
• mc : demo::D060_Folding , loops , loops_kic , test::T400_Refinement , test::T650_LoopsKIC , test::T860_SubClassing_EnergyMethods , test::Workshop5test
• MC_ACCEPT : basic
• mConfig : utility::json_spirit
• mean() : numeric , numeric::statistics
• median() : numeric
• mem_tr : basic
• MessageListenerCOP : basic::mpi
• MessageListenerOP : basic::mpi
• MetaMaxExpressionCOP : numeric::expression_parser
• MetaMaxExpressionOP : numeric::expression_parser
• MetaMinExpressionCOP : numeric::expression_parser
• MetaMinExpressionOP : numeric::expression_parser
• MetricValueBaseCOP : basic
• MetricValueBaseOP : basic
• mFork() : BuildBindings
• mfork() : TestBindings
• middle_offset : loops_kic , test::T650_LoopsKIC
• midpoint() : numeric
• min() : numeric , ObjexxFCL , utility
• min_mover : app::delta_score_per_mutation , test::Workshop5test , test::Workshop7test
• min_pack : basic::options::OptionKeys
• min_type : loops_kic , test::T650_LoopsKIC
• MinExpressionCOP : numeric::expression_parser
• MinExpressionOP : numeric::expression_parser
• minimize_sidechains : basic::options::OptionKeys , core::options::OptionKeys
• minmover : test::T400_Refinement , test::T850_SubClassing
• MINMOVER_APPLY : basic
• MINOR : setup
• mm : app::delta_score_per_mutation , loops_kic , test::G200_Module_Region , test::T150_PyMOL_Integration , test::T650_LoopsKIC
• mm4060 : test::Workshop5test
• mObject : utility::json_spirit
• mod() : numeric , ObjexxFCL
• mode : contacts
• modelID : app::pyrosetta_toolkit::modules::SQLPDB
• modifiedres : clean_pdb_keep_ligand
• modp() : numeric::kinematic_closure
• modres : amino_acids
• modrf() : numeric::kinematic_closure
• modulo() : numeric , ObjexxFCL
• mol : assign_charges
• molfile2params_quick() : toolbox::load_ligand
• monolith_rosetta_library_name : BuildBindings
• movemap() : demo::D040_Movemap , loops , loops_kic , test::T400_Refinement , test::T650_LoopsKIC , test::Workshop4test , test::Workshop5test , test::Workshop7test , test::Workshop8test
• mover_3mer : loops , test::T400_Refinement , test::Workshop4test
• MPI_FAIL : utility::io::mpi_stream
• MPI_FILE_BUF : basic
• MPI_FILE_STATUS : utility::io::mpi_stream
• MPI_GATHER_BARRIER : basic
• mpi_init() : src
• MPI_JD2_WAITS_FOR_ARCHIVE : basic
• MPI_MASTER_BCAST_COORDS : basic
• MPI_MASTER_BCAST_NEW_COMM_SIZE : basic
• MPI_MASTER_BCAST_NEW_POOL_RANKS : basic
• MPI_MASTER_BCAST_NUM_STRUCTURES_TO_ADD : basic
• MPI_MASTER_BCAST_WINNING_RANKS : basic
• MPI_MASTER_BCAST_WINNING_STRUCTURES : basic
• MPI_NOTIFY_ARCHIVE : basic
• mpi_nprocs() : utility
• mpi_ostream : utility::io::mpi_stream
• MPI_POOL_MASTER_THINKS : basic
• MPI_POOL_SLAVE_THINKS : basic
• mpi_rank() : utility
• mpi_safe_std_err() : utility::options
• MPI_SEND_ACCEPTED : basic
• MPI_SEND_UPDATE : basic
• MPI_SLAVE_REPORT_NEW_COORDS : basic
• MPI_SLAVE_REPORT_SIZES : basic
• MPI_STREAM_CLOSE : utility::io::mpi_stream
• MPI_STREAM_FILE_EXIST : utility::io::mpi_stream
• MPI_STREAM_FLUSH : utility::io::mpi_stream
• MPI_STREAM_MSG : utility::io::mpi_stream
• MPI_STREAM_OPEN : utility::io::mpi_stream
• MPI_STREAM_OPEN_APPEND : utility::io::mpi_stream
• MPI_STREAM_SEND : utility::io::mpi_stream
• MPI_STREAM_TAG : utility::io::mpi_stream
• MPI_SUCCESS_APPEND : utility::io::mpi_stream
• MPI_SUCCESS_NEW : utility::io::mpi_stream
• MPI_SYNC_POOL_DIFF : basic
• mpi_tags : basic::mpi
• mpi_wostream : utility::io::mpi_stream
• MPIBARRIER : basic
• MPIBARRIER_BEGIN : basic
• MPIBARRIER_END : basic
• MPICANONICALSAMPLING : basic
• MPICOMMCREATION : basic
• MPIH_ADD_FIRST_STRUCTURE : basic
• MPIH_EVAL_AGAINST_NBR : basic
• MPIH_EVAL_CHECK_PROGRESS : basic
• MPIH_EVAL_COMMUNICATE_NEW : basic
• MPIH_PREPARE_WRITE_STRUCTURES : basic
• MPIH_UPDATE_EVAL : basic
• MPIH_WRITE_STRUCT : basic
• MPIJobDistributor() : src
• MPIPOOLCOMMUNICATION : basic
• msg_name() : utility
• MSWORD_FRIENDLY : app::pyrosetta_toolkit::modules::prettytable::prettytable
• multiply() : numeric
• multiply_matrix() : PyMOLPyRosettaServer
• MULTIPLY_SYMBOL : numeric::expression_parser
• MultiplyExpressionCOP : numeric::expression_parser
• MultiplyExpressionOP : numeric::expression_parser
• MULTIPOLE_ENERGIES : basic
• MULTIPOLE_SETUP : basic
• multMatrix() : numeric::kinematic_closure
• multTransMatrix() : numeric::kinematic_closure
• mutant_aa : demo::D090_Ala_scan
• mutant_pose : app::delta_score_per_mutation
• mutants_list : protocols::pmut_scan
• mutate_residue() : app::pyrosetta_toolkit::modules::protocols::DesignProtocols , demo::D090_Ala_scan , mp_ddG , predict_ddG , toolbox::mutants , toolbox
• mutRM() : app::pyrosetta_toolkit::modules::help
• mutSA() : app::pyrosetta_toolkit::modules::help
• mutSP() : app::pyrosetta_toolkit::modules::help
• mValue : utility::json_spirit
• mWait() : BuildBindings
• my_loop : loops , loops_kic , test::T650_LoopsKIC
• my_loops : loops , loops_kic , test::T650_LoopsKIC