Here is a list of all namespace members with links to the namespace documentation for each member:

- d -

• DALPHABALL : basic
• DALPHABALL_DERIV : basic
• data : app::delta_score_per_mutation
• data_filename : app::delta_score_per_mutation
• DATA_STORAGE : basic
• database : toolbox::load_ligand
• database_mode_from_name() : utility::sql_database
• DATABASE_PROTOCOL_AND_BATCH_ID_TAG : basic::mpi
• DatabaseResourceLocatorCOP : basic::resource_manager::locator
• DatabaseResourceLocatorOP : basic::resource_manager::locator
• DatabaseSessionLoaderCOP : basic::database
• DatabaseSessionLoaderOP : basic::database
• DatabaseSessionOptionsCOP : basic::database
• DatabaseSessionOptionsOP : basic::database
• date() : ObjexxFCL
• Dawson() : numeric::statistics
• db_partition_from_options() : basic::database
• DbDataTypeCOP : basic::database::schema_generator
• DbDataTypeOP : basic::database::schema_generator
• DbDataTypes : basic::database::schema_generator
• DbMoverMessageListenerCOP : basic::mpi
• DbMoverMessageListenerOP : basic::mpi
• DDG_cutoff : protocols::pmut_scan
• ddg_cycles : revert_app
• decode6bit() : utility
• decode_32_to_24() : utility
• decoy_num : app::surface_docking::surface_docking
• default : app::pyrosetta_toolkit::modules::DesignBreakdown
• DEFAULT : app::pyrosetta_toolkit::modules::prettytable::prettytable
• default : demo::D010_Pose_structure , demo::D020_Pose_scoring , demo::D030_Fold_tree , demo::D040_Movemap , demo::D050_Packer_task , demo::D060_Folding , demo::D070_Refinement , demo::D080_Loop_modeling , demo::D090_Ala_scan , demo::D100_Docking , demo::D110_DNA_interface , demo::D120_Ligand_interface
• default_buffer_size : utility::io::mpi_stream , zlib_stream
• DefaultStrategy : zlib_stream
• defineEnergyMethodCreator() : src
• deg2rad : numeric::constants::d , numeric::constants::f , numeric::constants::ld , numeric::constants::r
• DEGREES : numeric::conversions
• degrees() : numeric::conversions
• degrees_to_radians : numeric::constants::d , numeric::constants::f , numeric::constants::ld , numeric::constants::r
• delLoop() : app::pyrosetta_toolkit::modules::tools::loops
• deltaE : test::Workshop4test
• depth_first_search_sort() : utility::graph
• depth_first_visit() : utility::graph
• depth_first_visit_sort_impl() : utility::graph
• description : app::pyrosetta_toolkit::modules::prettytable::setup
• deserialize() : numeric
• design : revert_app
• design_loop_num : hbs_design , oop_design , peptoid_design
• desn_mc_temp : dddm
• dest : contacts
• det3() : numeric::model_quality
• DFUNC : basic
• DiagnosticDataAP : basic::datacache
• DiagnosticDataCAP : basic::datacache
• DiagnosticDataCOP : basic::datacache
• DiagnosticDataOP : basic::datacache
• dihedral() : numeric
• dihedral_degrees() : numeric
• dihedral_degrees_double() : numeric
• dihedral_deriv_second() : numeric::deriv
• dihedral_double() : numeric
• dihedral_p1_cosine_deriv() : numeric::deriv
• dihedral_p1_cosine_deriv_first() : numeric::deriv
• dihedral_p2_cosine_deriv() : numeric::deriv
• dihedral_p2_cosine_deriv_first() : numeric::deriv
• dihedral_radians() : numeric
• dihedral_radians_double() : numeric
• dir : app::surface_docking::surface_docking
• dirup() : pdb_to_molfile
• dist() : coordlib
• dist_sq() : coordlib
• distance() : numeric , ObjexxFCL
• distance_f1_f2_deriv() : numeric::deriv
• distance_squared() : numeric , ObjexxFCL
• disulf_file : app::surface_docking::surface_docking
• disulfide_partner : app::delta_score_per_mutation
• divide() : numeric
• DIVIDE_SYMBOL : numeric::expression_parser
• DivideExpressionCOP : numeric::expression_parser
• DivideExpressionOP : numeric::expression_parser
• dixon_eig() : numeric::kinematic_closure
• dixon_sturm() : numeric::kinematic_closure
• dixonResultant() : numeric::kinematic_closure
• dna_p : test::T880_Other
• dncase() : ObjexxFCL
• do_abs() : numeric
• do_add_symbol() : numeric
• do_cos() : numeric
• do_exp() : numeric
• do_ln() : numeric
• do_log() : numeric
• do_log10() : numeric
• do_log2() : numeric
• do_max() : numeric
• do_mean() : numeric
• do_median() : numeric
• do_min() : numeric
• do_pow() : numeric
• do_recursion() : numeric::random
• do_sin() : numeric
• do_sqrt() : numeric
• do_tan() : numeric
• dock_hires : test::Workshop7test
• dock_jump : docking , test::T600_Docking
• dock_lowres : test::Workshop7test
• dock_p : test::T600_Docking
• dock_pert : docking , test::T600_Docking
• dock_prot : docking
• docking_highres : docking
• docking_lowres : docking , test::T600_Docking
• dont_mutate_correct_charge : local
• dont_mutate_glyprocys : local
• dont_mutate_hbonded_sidechains : local
• dot() : coordlib , numeric , numeric::kinematic_closure , ObjexxFCL
• dot_product() : app::surface_docking::surf_param , Equations , numeric , ObjexxFCL , PhiPsi
• double_mutant_scan : protocols::pmut_scan
• double_of() : ObjexxFCL
• down_cast() : utility
• DRange : ObjexxFCL
• draw_membrane_planes() : PyMOLPyRosettaServer
• dump() : yaml
• dump_all() : yaml
• dumpPDB() : app::pyrosetta_toolkit::modules::tools::output
• dx_ddelta_omega1() : numeric::crick_equations
• dx_ddelta_z1() : numeric::crick_equations
• dx_ddz1() : numeric::crick_equations
• dx_domega1() : numeric::crick_equations
• dx_dr1() : numeric::crick_equations
• dy_ddelta_omega1() : numeric::crick_equations
• dy_ddelta_z1() : numeric::crick_equations
• dy_ddz1() : numeric::crick_equations
• dy_domega1() : numeric::crick_equations
• dy_dr1() : numeric::crick_equations
• dynamic_prof_calls : basic
• dynamic_prof_total : basic
• dz_ddelta_omega1() : numeric::crick_equations
• dz_ddelta_z1() : numeric::crick_equations
• dz_ddz1() : numeric::crick_equations
• dz_domega1() : numeric::crick_equations
• dz_dr1() : numeric::crick_equations