- c -

• CA() : PhiPsi
• calc_binding_energy() : demo::D090_Ala_scan
• calc_quadratic() : basic
• calc_rms() : numeric::model_quality
• calc_rms_fast() : numeric::model_quality
• calcCAcentroid() : loadPDB
• calculate_source_modification_date() : BuildBindings
• CASE_SENSITIVE() : platform::file
• ccd_angle() : numeric
• center() : numeric , ObjexxFCL
• center_at_origin() : loadPDB
• center_of_mass() : numeric
• centered() : ObjexxFCL
• centerG_P() : app::surface_docking::surf_param
• centerG_S() : app::surface_docking::surf_param
• chain_from_iterables() : arls_impl
• chainParams() : numeric::kinematic_closure , numeric::kinematic_closure::radians
• chainTORS() : numeric::kinematic_closure , numeric::kinematic_closure::radians
• chainXYZ() : numeric::kinematic_closure , numeric::kinematic_closure::radians
• CHAR() : ObjexxFCL::Fortran
• char_equali() : ObjexxFCL , utility::file
• char_of() : ObjexxFCL
• chat() : basic::options
• check_and_print_pdb() : clean_pdb_keep_ligand
• check_cast() : basic
• check_statement_sanity() : basic::database
• citation() : app::pyrosetta_toolkit::modules::help
• clamp() : numeric
• CLANG_XML() : tools::CppParser
• class_from_full_path() : exclude
• class_of() : exclude
• clean_whitespace() : app::pyrosetta_toolkit::modules::tools::output
• cleanATOM() : toolbox , toolbox::cleaning
• cleanCRYS() : toolbox , toolbox::cleaning
• clearLists() : app::pyrosetta_toolkit::window_modules::protocol_builder::ProtocolBuilder
• clock_factor() : basic
• closest_point_on_line() : numeric
• code_from_6bit() : utility
• code_to_6bit() : utility
• coloring_demo() : PyMOL_demo
• COMAS() : numeric::model_quality
• combine_identical_chains() : loadPDB
• combine_names() : utility::file
• comma_seperated_string_to_xyz() : numeric
• comparable() : ObjexxFCL , utility::keys
• compare_hbonds() : toolbox::mutants
• compare_mutants__() : toolbox::mutants
• compare_sequences() : toolbox::mutants
• compare_times() : compare_times
• compose() : yaml
• compose_all() : yaml
• compress() : ObjexxFCL
• compute_ddG() : mp_ddG , predict_ddG
• compute_plane_positions() : PyMOLPyRosettaServer
• cond_exit() : utility
• condenseReslist() : loadPDB
• connect_points() : PyMOLPyRosettaServer
• construct_kd_tree() : numeric::kdtree
• ContactList() : PlotSurfaceContactMap
• ContactMap() : ContactMap
• convert_array_to_str() : mp_ddG , predict_ddG
• convert_PDBLIST_to_sqlite3db() : app::pyrosetta_toolkit::modules::tools::output
• convert_to_loadedPDB() : loadPDB
• coord_angle() : coordlib
• coordinates() : PDBInfo , PhiPsi
• copy_header_directory() : BuildPackagedBindings
• copy_tree_contents() : BuildPackagedBindings
• copysign() : utility
• corr_int() : loadPDB
• corrcoef() : numeric::statistics
• corrcoef_with_provided_mean_and_std_dev() : numeric::statistics
• cos_of() : numeric
• COSFXN() : numeric::crick_equations
• cot() : numeric
• cov() : numeric::statistics
• cov_with_provided_mean() : numeric::statistics
• create_blank_file() : utility::file
• create_directory() : utility::file
• create_directory_recursive() : utility::file
• create_extra_output() : apps::public1::scenarios::chemically_conjugated_docking
• create_temp_filename() : utility::file
• createRG() : numeric::random
• createSeqFile() : app::pyrosetta_toolkit::modules::tools::output
• cross() : coordlib , numeric , numeric::kinematic_closure , numeric::kinematic_closure::radians , ObjexxFCL
• cross_product() : app::surface_docking::surf_param , Equations , numeric , ObjexxFCL , PhiPsi
• csc() : numeric
• cube() : numeric , ObjexxFCL
• cumulative() : numeric