Here is a list of all namespace members with links to the namespace documentation for each member:

- f -

f : demo::D060_Folding
F() : ObjexxFCL::format
fa_closure_protocol : basic::options::OptionKeys::loops , loops
fa_custom : pyrosetta::toolbox::load_ligand , toolbox::load_ligand
fa_custom_pair_distance_file : basic::options::OptionKeys::score , score
fa_dun_thresh : basic::options::OptionKeys::willmatch , willmatch
fa_Hatr : basic::options::OptionKeys::score , score
fa_max_dis : basic::options::OptionKeys::score , score
Fa_Membed_update : basic::options::OptionKeys::membrane , membrane
fa_refine : basic::options::OptionKeys::smhybrid , smhybrid
fa_relax : app::surface_docking::surface_docking
fa_relax_moves : basic::options::OptionKeys::remodel::staged_sampling , remodel::staged_sampling
fa_stack_base_base_only : basic::options::OptionKeys::score , score
fa_stack_lr_dist_cutoff : basic::options::OptionKeys::score , score
fa_stack_lr_prefactor : basic::options::OptionKeys::score , score
fa_stack_lr_stack_cutoff : basic::options::OptionKeys::score , score
fa_stack_sol_dist_cutoff : basic::options::OptionKeys::score , score
fa_stack_sol_prefactor : basic::options::OptionKeys::score , score
fa_stack_sol_stack_cutoff : basic::options::OptionKeys::score , score
fa_standard : pyrosetta::toolbox::load_ligand , toolbox::load_ligand
faatr : basic::options::OptionKeys::mh::filter , mh::filter
faatr_or_hb : basic::options::OptionKeys::mh::filter , mh::filter
faatr_or_hbbb : basic::options::OptionKeys::mh::filter , mh::filter
factorA : basic::options::OptionKeys::bbg , bbg
factorB : basic::options::OptionKeys::bbg , bbg
facts_adjbb_elec_scale : basic::options::OptionKeys::score , score
facts_adjbb_solv_scale : basic::options::OptionKeys::score , score
facts_adjbs_elec_scale : basic::options::OptionKeys::score , score
facts_adjbs_solv_scale : basic::options::OptionKeys::score , score
facts_asp_patch : basic::options::OptionKeys::score , score
facts_binding_affinity : basic::options::OptionKeys::score , score
facts_charge_dir : basic::options::OptionKeys::score , score
facts_default : basic::options::OptionKeys::corrections , corrections
facts_die : basic::options::OptionKeys::score , score
facts_dshift : basic::options::OptionKeys::score , score
facts_eff_charge_dir : basic::options::OptionKeys::score , score
facts_eq_type : basic::options::OptionKeys::score , score
facts_GBpair_cut : basic::options::OptionKeys::score , score
FACTS_GET_ALL_BORN_RADII : basic
facts_intbb_elec_scale : basic::options::OptionKeys::score , score
facts_intbb_solv_scale : basic::options::OptionKeys::score , score
facts_intbs_elec_scale : basic::options::OptionKeys::score , score
facts_intbs_solv_scale : basic::options::OptionKeys::score , score
facts_intrascale_by_level : basic::options::OptionKeys::score , score
facts_intsc_elec_scale : basic::options::OptionKeys::score , score
facts_intsc_solv_scale : basic::options::OptionKeys::score , score
facts_kappa : basic::options::OptionKeys::score , score
facts_plane_aa : basic::options::OptionKeys::score , score
facts_plane_to_self : basic::options::OptionKeys::score , score
FACTS_ROTAMER_BACKGROUND_ENERGIES : basic
FACTS_ROTAMER_PAIR_ENERGIES : basic
facts_saltbridge_correction : basic::options::OptionKeys::score , score
FACTS_SETUP_FOR_PACKING : basic
fail_on_bad_hbond : basic::options::OptionKeys::in::file , in::file
fail_unclosed() : abrelax , basic::options::OptionKeys::abrelax
failed_job_exception : basic::options::OptionKeys::jd2 , jd2
FallbackConfigurationCOP : basic::resource_manager
FallbackConfigurationCreatorCOP : basic::resource_manager
FallbackConfigurationCreatorOP : basic::resource_manager
FallbackConfigurationOP : basic::resource_manager
False : rosetta_binders::has_insertion_operator_implementation
false_negative : numeric
false_positive : numeric
farna : basic::options::OptionKeys::rna::farna , rna::farna
FArray1_bool : ObjexxFCL
FArray1_byte : ObjexxFCL
FArray1_char : ObjexxFCL
FArray1_double : ObjexxFCL
FArray1_float : ObjexxFCL
FArray1_Fstring : ObjexxFCL
FArray1_int : ObjexxFCL
FArray1_long : ObjexxFCL
FArray1_longdouble : ObjexxFCL
FArray1_sbyte : ObjexxFCL
FArray1_schar : ObjexxFCL
FArray1_short : ObjexxFCL
FArray1_size : ObjexxFCL
FArray1_size_t : ObjexxFCL
FArray1_string : ObjexxFCL
FArray1_ubyte : ObjexxFCL
FArray1_uchar : ObjexxFCL
FArray1_uint : ObjexxFCL
FArray1_ulong : ObjexxFCL
FArray1_ushort : ObjexxFCL
FArray1A_bool : ObjexxFCL
FArray1A_byte : ObjexxFCL
FArray1A_char : ObjexxFCL
FArray1A_double : ObjexxFCL
FArray1A_float : ObjexxFCL
FArray1A_Fstring : ObjexxFCL
FArray1A_int : ObjexxFCL
FArray1A_long : ObjexxFCL
FArray1A_longdouble : ObjexxFCL
FArray1A_sbyte : ObjexxFCL
FArray1A_schar : ObjexxFCL
FArray1A_short : ObjexxFCL
FArray1A_size : ObjexxFCL
FArray1A_size_t : ObjexxFCL
FArray1A_string : ObjexxFCL
FArray1A_ubyte : ObjexxFCL
FArray1A_uchar : ObjexxFCL
FArray1A_uint : ObjexxFCL
FArray1A_ulong : ObjexxFCL
FArray1A_ushort : ObjexxFCL
FArray1D_bool : ObjexxFCL
FArray1D_byte : ObjexxFCL
FArray1D_char : ObjexxFCL
FArray1D_double : ObjexxFCL
FArray1D_float : ObjexxFCL
FArray1D_Fstring : ObjexxFCL
FArray1D_int : ObjexxFCL
FArray1D_long : ObjexxFCL
FArray1D_longdouble : ObjexxFCL
FArray1D_sbyte : ObjexxFCL
FArray1D_schar : ObjexxFCL
FArray1D_short : ObjexxFCL
FArray1D_size : ObjexxFCL
FArray1D_size_t : ObjexxFCL
FArray1D_string : ObjexxFCL
FArray1D_ubyte : ObjexxFCL
FArray1D_uchar : ObjexxFCL
FArray1D_uint : ObjexxFCL
FArray1D_ulong : ObjexxFCL
FArray1D_ushort : ObjexxFCL
FArray1P_bool : ObjexxFCL
FArray1P_byte : ObjexxFCL
FArray1P_char : ObjexxFCL
FArray1P_double : ObjexxFCL
FArray1P_float : ObjexxFCL
FArray1P_Fstring : ObjexxFCL
FArray1P_int : ObjexxFCL
FArray1P_long : ObjexxFCL
FArray1P_longdouble : ObjexxFCL
FArray1P_sbyte : ObjexxFCL
FArray1P_schar : ObjexxFCL
FArray1P_short : ObjexxFCL
FArray1P_size : ObjexxFCL
FArray1P_size_t : ObjexxFCL
FArray1P_string : ObjexxFCL
FArray1P_ubyte : ObjexxFCL
FArray1P_uchar : ObjexxFCL
FArray1P_uint : ObjexxFCL
FArray1P_ulong : ObjexxFCL
FArray1P_ushort : ObjexxFCL
FArray2_bool : ObjexxFCL
FArray2_byte : ObjexxFCL
FArray2_char : ObjexxFCL
FArray2_double : ObjexxFCL
FArray2_float : ObjexxFCL
FArray2_Fstring : ObjexxFCL
FArray2_int : ObjexxFCL
FArray2_long : ObjexxFCL
FArray2_longdouble : ObjexxFCL
FArray2_sbyte : ObjexxFCL
FArray2_schar : ObjexxFCL
FArray2_short : ObjexxFCL
FArray2_size : ObjexxFCL
FArray2_size_t : ObjexxFCL
FArray2_string : ObjexxFCL
FArray2_ubyte : ObjexxFCL
FArray2_uchar : ObjexxFCL
FArray2_uint : ObjexxFCL
FArray2_ulong : ObjexxFCL
FArray2_ushort : ObjexxFCL
FArray2A_bool : ObjexxFCL
FArray2A_byte : ObjexxFCL
FArray2A_char : ObjexxFCL
FArray2A_double : ObjexxFCL
FArray2A_float : ObjexxFCL
FArray2A_Fstring : ObjexxFCL
FArray2A_int : ObjexxFCL
FArray2A_long : ObjexxFCL
FArray2A_longdouble : ObjexxFCL
FArray2A_sbyte : ObjexxFCL
FArray2A_schar : ObjexxFCL
FArray2A_short : ObjexxFCL
FArray2A_size : ObjexxFCL
FArray2A_size_t : ObjexxFCL
FArray2A_string : ObjexxFCL
FArray2A_ubyte : ObjexxFCL
FArray2A_uchar : ObjexxFCL
FArray2A_uint : ObjexxFCL
FArray2A_ulong : ObjexxFCL
FArray2A_ushort : ObjexxFCL
FArray2D_bool : ObjexxFCL
FArray2D_byte : ObjexxFCL
FArray2D_char : ObjexxFCL
FArray2D_double : ObjexxFCL
FArray2D_float : ObjexxFCL
FArray2D_Fstring : ObjexxFCL
FArray2D_int : ObjexxFCL
FArray2D_long : ObjexxFCL
FArray2D_longdouble : ObjexxFCL
FArray2D_sbyte : ObjexxFCL
FArray2D_schar : ObjexxFCL
FArray2D_short : ObjexxFCL
FArray2D_size : ObjexxFCL
FArray2D_size_t : ObjexxFCL
FArray2D_string : ObjexxFCL
FArray2D_ubyte : ObjexxFCL
FArray2D_uchar : ObjexxFCL
FArray2D_uint : ObjexxFCL
FArray2D_ulong : ObjexxFCL
FArray2D_ushort : ObjexxFCL
FArray2P_bool : ObjexxFCL
FArray2P_byte : ObjexxFCL
FArray2P_char : ObjexxFCL
FArray2P_double : ObjexxFCL
FArray2P_float : ObjexxFCL
FArray2P_Fstring : ObjexxFCL
FArray2P_int : ObjexxFCL
FArray2P_long : ObjexxFCL
FArray2P_longdouble : ObjexxFCL
FArray2P_sbyte : ObjexxFCL
FArray2P_schar : ObjexxFCL
FArray2P_short : ObjexxFCL
FArray2P_size : ObjexxFCL
FArray2P_size_t : ObjexxFCL
FArray2P_string : ObjexxFCL
FArray2P_ubyte : ObjexxFCL
FArray2P_uchar : ObjexxFCL
FArray2P_uint : ObjexxFCL
FArray2P_ulong : ObjexxFCL
FArray2P_ushort : ObjexxFCL
FArray3_bool : ObjexxFCL
FArray3_byte : ObjexxFCL
FArray3_char : ObjexxFCL
FArray3_double : ObjexxFCL
FArray3_float : ObjexxFCL
FArray3_Fstring : ObjexxFCL
FArray3_int : ObjexxFCL
FArray3_long : ObjexxFCL
FArray3_longdouble : ObjexxFCL
FArray3_sbyte : ObjexxFCL
FArray3_schar : ObjexxFCL
FArray3_short : ObjexxFCL
FArray3_size : ObjexxFCL
FArray3_size_t : ObjexxFCL
FArray3_string : ObjexxFCL
FArray3_ubyte : ObjexxFCL
FArray3_uchar : ObjexxFCL
FArray3_uint : ObjexxFCL
FArray3_ulong : ObjexxFCL
FArray3_ushort : ObjexxFCL
FArray3A_bool : ObjexxFCL
FArray3A_byte : ObjexxFCL
FArray3A_char : ObjexxFCL
FArray3A_double : ObjexxFCL
FArray3A_float : ObjexxFCL
FArray3A_Fstring : ObjexxFCL
FArray3A_int : ObjexxFCL
FArray3A_long : ObjexxFCL
FArray3A_longdouble : ObjexxFCL
FArray3A_sbyte : ObjexxFCL
FArray3A_schar : ObjexxFCL
FArray3A_short : ObjexxFCL
FArray3A_size : ObjexxFCL
FArray3A_size_t : ObjexxFCL
FArray3A_string : ObjexxFCL
FArray3A_ubyte : ObjexxFCL
FArray3A_uchar : ObjexxFCL
FArray3A_uint : ObjexxFCL
FArray3A_ulong : ObjexxFCL
FArray3A_ushort : ObjexxFCL
FArray3D_bool : ObjexxFCL
FArray3D_byte : ObjexxFCL
FArray3D_char : ObjexxFCL
FArray3D_double : ObjexxFCL
FArray3D_float : ObjexxFCL
FArray3D_Fstring : ObjexxFCL
FArray3D_int : ObjexxFCL
FArray3D_long : ObjexxFCL
FArray3D_longdouble : ObjexxFCL
FArray3D_sbyte : ObjexxFCL
FArray3D_schar : ObjexxFCL
FArray3D_short : ObjexxFCL
FArray3D_size : ObjexxFCL
FArray3D_size_t : ObjexxFCL
FArray3D_string : ObjexxFCL
FArray3D_ubyte : ObjexxFCL
FArray3D_uchar : ObjexxFCL
FArray3D_uint : ObjexxFCL
FArray3D_ulong : ObjexxFCL
FArray3D_ushort : ObjexxFCL
FArray3P_bool : ObjexxFCL
FArray3P_byte : ObjexxFCL
FArray3P_char : ObjexxFCL
FArray3P_double : ObjexxFCL
FArray3P_float : ObjexxFCL
FArray3P_Fstring : ObjexxFCL
FArray3P_int : ObjexxFCL
FArray3P_long : ObjexxFCL
FArray3P_longdouble : ObjexxFCL
FArray3P_sbyte : ObjexxFCL
FArray3P_schar : ObjexxFCL
FArray3P_short : ObjexxFCL
FArray3P_size : ObjexxFCL
FArray3P_size_t : ObjexxFCL
FArray3P_string : ObjexxFCL
FArray3P_ubyte : ObjexxFCL
FArray3P_uchar : ObjexxFCL
FArray3P_uint : ObjexxFCL
FArray3P_ulong : ObjexxFCL
FArray3P_ushort : ObjexxFCL
FArray4_bool : ObjexxFCL
FArray4_byte : ObjexxFCL
FArray4_char : ObjexxFCL
FArray4_double : ObjexxFCL
FArray4_float : ObjexxFCL
FArray4_Fstring : ObjexxFCL
FArray4_int : ObjexxFCL
FArray4_long : ObjexxFCL
FArray4_longdouble : ObjexxFCL
FArray4_sbyte : ObjexxFCL
FArray4_schar : ObjexxFCL
FArray4_short : ObjexxFCL
FArray4_size : ObjexxFCL
FArray4_size_t : ObjexxFCL
FArray4_string : ObjexxFCL
FArray4_ubyte : ObjexxFCL
FArray4_uchar : ObjexxFCL
FArray4_uint : ObjexxFCL
FArray4_ulong : ObjexxFCL
FArray4_ushort : ObjexxFCL
FArray4A_bool : ObjexxFCL
FArray4A_byte : ObjexxFCL
FArray4A_char : ObjexxFCL
FArray4A_double : ObjexxFCL
FArray4A_float : ObjexxFCL
FArray4A_Fstring : ObjexxFCL
FArray4A_int : ObjexxFCL
FArray4A_long : ObjexxFCL
FArray4A_longdouble : ObjexxFCL
FArray4A_sbyte : ObjexxFCL
FArray4A_schar : ObjexxFCL
FArray4A_short : ObjexxFCL
FArray4A_size : ObjexxFCL
FArray4A_size_t : ObjexxFCL
FArray4A_string : ObjexxFCL
FArray4A_ubyte : ObjexxFCL
FArray4A_uchar : ObjexxFCL
FArray4A_uint : ObjexxFCL
FArray4A_ulong : ObjexxFCL
FArray4A_ushort : ObjexxFCL
FArray4D_bool : ObjexxFCL
FArray4D_byte : ObjexxFCL
FArray4D_char : ObjexxFCL
FArray4D_double : ObjexxFCL
FArray4D_float : ObjexxFCL
FArray4D_Fstring : ObjexxFCL
FArray4D_int : ObjexxFCL
FArray4D_long : ObjexxFCL
FArray4D_longdouble : ObjexxFCL
FArray4D_sbyte : ObjexxFCL
FArray4D_schar : ObjexxFCL
FArray4D_short : ObjexxFCL
FArray4D_size : ObjexxFCL
FArray4D_size_t : ObjexxFCL
FArray4D_string : ObjexxFCL
FArray4D_ubyte : ObjexxFCL
FArray4D_uchar : ObjexxFCL
FArray4D_uint : ObjexxFCL
FArray4D_ulong : ObjexxFCL
FArray4D_ushort : ObjexxFCL
FArray4P_bool : ObjexxFCL
FArray4P_byte : ObjexxFCL
FArray4P_char : ObjexxFCL
FArray4P_double : ObjexxFCL
FArray4P_float : ObjexxFCL
FArray4P_Fstring : ObjexxFCL
FArray4P_int : ObjexxFCL
FArray4P_long : ObjexxFCL
FArray4P_longdouble : ObjexxFCL
FArray4P_sbyte : ObjexxFCL
FArray4P_schar : ObjexxFCL
FArray4P_short : ObjexxFCL
FArray4P_size : ObjexxFCL
FArray4P_size_t : ObjexxFCL
FArray4P_string : ObjexxFCL
FArray4P_ubyte : ObjexxFCL
FArray4P_uchar : ObjexxFCL
FArray4P_uint : ObjexxFCL
FArray4P_ulong : ObjexxFCL
FArray4P_ushort : ObjexxFCL
FArray5_bool : ObjexxFCL
FArray5_byte : ObjexxFCL
FArray5_char : ObjexxFCL
FArray5_double : ObjexxFCL
FArray5_float : ObjexxFCL
FArray5_Fstring : ObjexxFCL
FArray5_int : ObjexxFCL
FArray5_long : ObjexxFCL
FArray5_longdouble : ObjexxFCL
FArray5_sbyte : ObjexxFCL
FArray5_schar : ObjexxFCL
FArray5_short : ObjexxFCL
FArray5_size : ObjexxFCL
FArray5_size_t : ObjexxFCL
FArray5_string : ObjexxFCL
FArray5_ubyte : ObjexxFCL
FArray5_uchar : ObjexxFCL
FArray5_uint : ObjexxFCL
FArray5_ulong : ObjexxFCL
FArray5_ushort : ObjexxFCL
FArray5A_bool : ObjexxFCL
FArray5A_byte : ObjexxFCL
FArray5A_char : ObjexxFCL
FArray5A_double : ObjexxFCL
FArray5A_float : ObjexxFCL
FArray5A_Fstring : ObjexxFCL
FArray5A_int : ObjexxFCL
FArray5A_long : ObjexxFCL
FArray5A_longdouble : ObjexxFCL
FArray5A_sbyte : ObjexxFCL
FArray5A_schar : ObjexxFCL
FArray5A_short : ObjexxFCL
FArray5A_size : ObjexxFCL
FArray5A_size_t : ObjexxFCL
FArray5A_string : ObjexxFCL
FArray5A_ubyte : ObjexxFCL
FArray5A_uchar : ObjexxFCL
FArray5A_uint : ObjexxFCL
FArray5A_ulong : ObjexxFCL
FArray5A_ushort : ObjexxFCL
FArray5D_bool : ObjexxFCL
FArray5D_byte : ObjexxFCL
FArray5D_char : ObjexxFCL
FArray5D_double : ObjexxFCL
FArray5D_float : ObjexxFCL
FArray5D_Fstring : ObjexxFCL
FArray5D_int : ObjexxFCL
FArray5D_long : ObjexxFCL
FArray5D_longdouble : ObjexxFCL
FArray5D_sbyte : ObjexxFCL
FArray5D_schar : ObjexxFCL
FArray5D_short : ObjexxFCL
FArray5D_size : ObjexxFCL
FArray5D_size_t : ObjexxFCL
FArray5D_string : ObjexxFCL
FArray5D_ubyte : ObjexxFCL
FArray5D_uchar : ObjexxFCL
FArray5D_uint : ObjexxFCL
FArray5D_ulong : ObjexxFCL
FArray5D_ushort : ObjexxFCL
FArray5P_bool : ObjexxFCL
FArray5P_byte : ObjexxFCL
FArray5P_char : ObjexxFCL
FArray5P_double : ObjexxFCL
FArray5P_float : ObjexxFCL
FArray5P_Fstring : ObjexxFCL
FArray5P_int : ObjexxFCL
FArray5P_long : ObjexxFCL
FArray5P_longdouble : ObjexxFCL
FArray5P_sbyte : ObjexxFCL
FArray5P_schar : ObjexxFCL
FArray5P_short : ObjexxFCL
FArray5P_size : ObjexxFCL
FArray5P_size_t : ObjexxFCL
FArray5P_string : ObjexxFCL
FArray5P_ubyte : ObjexxFCL
FArray5P_uchar : ObjexxFCL
FArray5P_uint : ObjexxFCL
FArray5P_ulong : ObjexxFCL
FArray5P_ushort : ObjexxFCL
FArray6_bool : ObjexxFCL
FArray6_byte : ObjexxFCL
FArray6_char : ObjexxFCL
FArray6_double : ObjexxFCL
FArray6_float : ObjexxFCL
FArray6_Fstring : ObjexxFCL
FArray6_int : ObjexxFCL
FArray6_long : ObjexxFCL
FArray6_longdouble : ObjexxFCL
FArray6_sbyte : ObjexxFCL
FArray6_schar : ObjexxFCL
FArray6_short : ObjexxFCL
FArray6_size : ObjexxFCL
FArray6_size_t : ObjexxFCL
FArray6_string : ObjexxFCL
FArray6_ubyte : ObjexxFCL
FArray6_uchar : ObjexxFCL
FArray6_uint : ObjexxFCL
FArray6_ulong : ObjexxFCL
FArray6_ushort : ObjexxFCL
FArray6A_bool : ObjexxFCL
FArray6A_byte : ObjexxFCL
FArray6A_char : ObjexxFCL
FArray6A_double : ObjexxFCL
FArray6A_float : ObjexxFCL
FArray6A_Fstring : ObjexxFCL
FArray6A_int : ObjexxFCL
FArray6A_long : ObjexxFCL
FArray6A_longdouble : ObjexxFCL
FArray6A_sbyte : ObjexxFCL
FArray6A_schar : ObjexxFCL
FArray6A_short : ObjexxFCL
FArray6A_size : ObjexxFCL
FArray6A_size_t : ObjexxFCL
FArray6A_string : ObjexxFCL
FArray6A_ubyte : ObjexxFCL
FArray6A_uchar : ObjexxFCL
FArray6A_uint : ObjexxFCL
FArray6A_ulong : ObjexxFCL
FArray6A_ushort : ObjexxFCL
FArray6D_bool : ObjexxFCL
FArray6D_byte : ObjexxFCL
FArray6D_char : ObjexxFCL
FArray6D_double : ObjexxFCL
FArray6D_float : ObjexxFCL
FArray6D_Fstring : ObjexxFCL
FArray6D_int : ObjexxFCL
FArray6D_long : ObjexxFCL
FArray6D_longdouble : ObjexxFCL
FArray6D_sbyte : ObjexxFCL
FArray6D_schar : ObjexxFCL
FArray6D_short : ObjexxFCL
FArray6D_size : ObjexxFCL
FArray6D_size_t : ObjexxFCL
FArray6D_string : ObjexxFCL
FArray6D_ubyte : ObjexxFCL
FArray6D_uchar : ObjexxFCL
FArray6D_uint : ObjexxFCL
FArray6D_ulong : ObjexxFCL
FArray6D_ushort : ObjexxFCL
FArray6P_bool : ObjexxFCL
FArray6P_byte : ObjexxFCL
FArray6P_char : ObjexxFCL
FArray6P_double : ObjexxFCL
FArray6P_float : ObjexxFCL
FArray6P_Fstring : ObjexxFCL
FArray6P_int : ObjexxFCL
FArray6P_long : ObjexxFCL
FArray6P_longdouble : ObjexxFCL
FArray6P_sbyte : ObjexxFCL
FArray6P_schar : ObjexxFCL
FArray6P_short : ObjexxFCL
FArray6P_size : ObjexxFCL
FArray6P_size_t : ObjexxFCL
FArray6P_string : ObjexxFCL
FArray6P_ubyte : ObjexxFCL
FArray6P_uchar : ObjexxFCL
FArray6P_uint : ObjexxFCL
FArray6P_ulong : ObjexxFCL
FArray6P_ushort : ObjexxFCL
FArray_bool : ObjexxFCL
FArray_byte : ObjexxFCL
FArray_char : ObjexxFCL
FArray_double : ObjexxFCL
FArray_float : ObjexxFCL
FArray_Fstring : ObjexxFCL
FArray_int : ObjexxFCL
FArray_long : ObjexxFCL
FArray_longdouble : ObjexxFCL
FARRAY_MANIPULATION : basic
FArray_sbyte : ObjexxFCL
FArray_schar : ObjexxFCL
FArray_short : ObjexxFCL
FArray_size : ObjexxFCL
FArray_size_t : ObjexxFCL
FArray_string : ObjexxFCL
FArray_to_vector_of_xyzvectors() : numeric
FArray_to_xyzmatrix() : numeric
FArray_ubyte : ObjexxFCL
FArray_uchar : ObjexxFCL
FArray_uint : ObjexxFCL
FArray_ulong : ObjexxFCL
FArray_ushort : ObjexxFCL
FArraySection_bool : ObjexxFCL
FArraySection_byte : ObjexxFCL
FArraySection_char : ObjexxFCL
FArraySection_double : ObjexxFCL
FArraySection_float : ObjexxFCL
FArraySection_Fstring : ObjexxFCL
FArraySection_int : ObjexxFCL
FArraySection_long : ObjexxFCL
FArraySection_longdouble : ObjexxFCL
FArraySection_sbyte : ObjexxFCL
FArraySection_schar : ObjexxFCL
FArraySection_short : ObjexxFCL
FArraySection_size : ObjexxFCL
FArraySection_size_t : ObjexxFCL
FArraySection_string : ObjexxFCL
FArraySection_ubyte : ObjexxFCL
FArraySection_uchar : ObjexxFCL
FArraySection_uint : ObjexxFCL
FArraySection_ulong : ObjexxFCL
FArraySection_ushort : ObjexxFCL
fast : basic::options::OptionKeys::dna::specificity , basic::options::OptionKeys::loops , basic::options::OptionKeys::relax , dna::specificity , loops , relax
fast_loops : basic::options::OptionKeys::fast_loops , fast_loops
fast_relax_rounds : basic::options::OptionKeys::cyclic_peptide , cyclic_peptide
fast_relax_sequence_file : basic::options::OptionKeys::fast_loops , fast_loops
fast_remainder() : numeric , ObjexxFCL
fast_sc_moves : basic::options::OptionKeys::canonical_sampling::probabilities , canonical_sampling::probabilities
fast_sc_moves_ntrials : basic::options::OptionKeys::canonical_sampling::probabilities , canonical_sampling::probabilities
fasta : basic::options::OptionKeys::in::file , in::file
fasta_filename : demo::D060_Folding
fastaid : clean_pdb_keep_ligand , pyrosetta::toolbox::make_rna_rosetta_ready , toolbox::make_rna_rosetta_ready
fastaseq : clean_pdb_keep_ligand
fastdens_params : basic::options::OptionKeys::edensity , edensity
fastdens_wt : basic::options::OptionKeys::edensity , edensity
fastrelax() : abinitio , basic::options::OptionKeys::abinitio
fav_nat_bonus : basic::options::OptionKeys::matdes::design , matdes::design
favor_native_res : basic::options::OptionKeys::enzdes , enzdes
fft() : numeric::fourier
fft2() : numeric::fourier
fft3() : numeric::fourier
fft3_dynamic() : numeric::fourier
fiber_diffraction : basic::options::OptionKeys::score::fiber_diffraction , score::fiber_diffraction
file : basic::options::OptionKeys::in::file , basic::options::OptionKeys::out::file , in::file , out::file
file_ : tools::CppParser
file_basename() : utility::file , utility
file_contents() : utility
file_delete() : utility::file
file_exists() : utility::file
file_extension() : utility::file
file_list_tracer : basic::resource_manager::locator
file_name_prefix_for_binder() : binder
FILE_OPTION : utility::options
file_prefix : basic::options::OptionKeys::motifs , motifs
file_size() : utility::file
FILE_VECTOR_OPTION : utility::options
FileContentsMapCOP : utility::io
FileContentsMapOP : utility::io
FileListResourceLocatorCOP : basic::resource_manager::locator
FileListResourceLocatorOP : basic::resource_manager::locator
filename : test::G202_Module_PythonPDB , utility
FileOption : basic::options
FileOptionKey : basic::options
FileStreamCOP : basic::resource_manager::locator
FileStreamOP : basic::resource_manager::locator
FileSystemResourceLocatorCOP : basic::resource_manager::locator
FileSystemResourceLocatorOP : basic::resource_manager::locator
FileVectorOption : basic::options
FileVectorOptionKey : basic::options
filter : basic::options::OptionKeys::mh::filter , mh::filter
filter_by_phipsi : basic::options::OptionKeys::lh , lh
filter_chain_closure : basic::options::OptionKeys::rna::farna , rna::farna
filter_chain_closure_distance : basic::options::OptionKeys::rna::farna , rna::farna
filter_chain_closure_halfway : basic::options::OptionKeys::rna::farna , rna::farna
filter_code_creators() : exclude
filter_colliding_upstream_residues : basic::options::OptionKeys::match , match
filter_cst_file : basic::options::OptionKeys::fast_loops , fast_loops
filter_cst_weight : basic::options::OptionKeys::fast_loops , fast_loops
filter_harvest : basic::options::OptionKeys::mh::filter , mh::filter
filter_io : basic::options::OptionKeys::mh::filter , mh::filter
filter_JC : basic::options::OptionKeys::frags , frags
filter_lores_base_pairs : basic::options::OptionKeys::rna::farna , rna::farna
filter_lores_base_pairs_early : basic::options::OptionKeys::rna::farna , rna::farna
filter_native_big_bins : basic::options::OptionKeys::stepwise::protein , stepwise::protein
filter_omega : basic::options::OptionKeys::remodel , remodel
filter_output_filename : basic::options::OptionKeys::stepwise::rna , stepwise::rna
filter_oversaturated_hbond_acceptors : basic::options::OptionKeys::cyclic_peptide , cyclic_peptide
filter_radius : basic::options::OptionKeys::remodel , remodel
filter_rise : basic::options::OptionKeys::remodel , remodel
filter_stage2_beginning : basic::options::OptionKeys::relax , relax
filter_stage2_end : basic::options::OptionKeys::relax , relax
filter_stage2_half : basic::options::OptionKeys::relax , relax
filter_stage2_quarter : basic::options::OptionKeys::relax , relax
filter_templates : basic::options::OptionKeys::jumps , jumps
filter_trial : basic::options::OptionKeys::flxbb , flxbb
filter_type : basic::options::OptionKeys::flxbb , flxbb
filter_up_to_maxlib : basic::options::OptionKeys::lh , lh
filter_upstream_downstream_collisions : basic::options::OptionKeys::match , match
filter_user_alignment_res : basic::options::OptionKeys::stepwise::rna , stepwise::rna
filterContacts() : calccontacts
filters() : AnchoredDesign::filters , basic::options::OptionKeys::AnchoredDesign::filters , basic::options::OptionKeys::filters , filters
final_clean_fastrelax : basic::options::OptionKeys::loops , loops
final_clean_relax() : abinitio , basic::options::OptionKeys::abinitio
final_min_glycans : basic::options::OptionKeys::carbohydrates::glycan_relax , carbohydrates::glycan_relax
final_repack_without_ligand : basic::options::OptionKeys::enzdes , enzdes
final_score_filter : basic::options::OptionKeys::loops , loops
final_temp : loops , loops_kic , test::T650_LoopsKIC
final_temp_high : demo::D080_Loop_modeling
final_temp_low : demo::D080_Loop_modeling
FINALIZE : basic
finalize() : exclude
finalize2() : exclude
finalize_old() : exclude
find_CA() : sidechain_cst_3
find_cache_file() : basic::database
find_closest() : utility
find_database_path() : basic::database
find_file() : arls_impl
find_first_non_zero() : utility::json_spirit
find_nearest_value() : numeric
find_neighbors : basic::options::OptionKeys::remodel::design , remodel::design
find_neighbors_3dgrid : basic::options::OptionKeys::score , score
find_neighbors_stripehash : basic::options::OptionKeys::score , score
find_programs() : arls_impl
FIND_SUGAR_AND_SUITE_FRAGS_I : basic
FIND_SUGAR_AND_SUITE_FRAGS_II : basic
find_value() : utility::json_spirit
findUU() : numeric::model_quality
finer_sampling_at_chain_closure : basic::options::OptionKeys::stepwise::rna , stepwise::rna
fingerprint : basic::options::OptionKeys::fingerprint , fingerprint
first : assign_charges
first_principal_component() : numeric
fit_method : basic::options::OptionKeys::rdc , rdc
fit_pddf_area : basic::options::OptionKeys::score::saxs , score::saxs
fit_reference_energies_to_aa_profile_recovery : basic::options::OptionKeys::optE , optE
fix : basic::options::OptionKeys::optE , optE
fix_aligned_residues : basic::options::OptionKeys::templates , templates
fix_boolean_types() : binder
fix_ca_bond_angles : basic::options::OptionKeys::loops , loops
fix_catalytic_aa : basic::options::OptionKeys::enzdes , enzdes
fix_chainbreak : basic::options::OptionKeys::jumps , jumps
fix_disulf : basic::options::OptionKeys::in , in
fix_frag_file : basic::options::OptionKeys::templates , templates
fix_his_tautomer : basic::options::OptionKeys::packing , packing
fix_jumps : basic::options::OptionKeys::jumps , jumps
fix_margin : basic::options::OptionKeys::templates , templates
fix_natsc : basic::options::OptionKeys::loops , loops
fix_normAzz : basic::options::OptionKeys::rdc , rdc
fix_omega : basic::options::OptionKeys::relax , relax
fix_residues_to_native() : abinitio , basic::options::OptionKeys::abinitio
fix_short_segment : basic::options::OptionKeys::bbg , bbg
fixbb_substitutions_scale : basic::options::OptionKeys::flexpack::annealer , flexpack::annealer
fixDa : basic::options::OptionKeys::rdc , rdc
fixed : basic::options::OptionKeys::optE , optE
fixed_Fstring_of() : ObjexxFCL
fixed_membrane : basic::options::OptionKeys::membrane , membrane
fixed_res : basic::options::OptionKeys::rna::farna::erraser , basic::options::OptionKeys::stepwise , basic::options::OptionKeys::willmatch , rna::farna::erraser , stepwise , willmatch
fixed_res_files : basic::options::OptionKeys::smhybrid , smhybrid
fixed_stems : basic::options::OptionKeys::rna::farna , rna::farna
fixed_string_of() : ObjexxFCL
fixEigenvector() : numeric::model_quality
fixFilename() : app::pyrosetta_toolkit::modules::tools::input
fixR : basic::options::OptionKeys::rdc , rdc
fixup : basic::options::OptionKeys::magnesium , magnesium
flag_altpos : clean_pdb_keep_ligand
flag_file_builder_import : app::pyrosetta_toolkit::window_main::menu
flag_insres : clean_pdb_keep_ligand
flag_misdns : clean_pdb_keep_ligand
flag_modres : clean_pdb_keep_ligand
flag_successful : clean_pdb_keep_ligand
flank_residue_min() : antibody , basic::options::OptionKeys::antibody
flex_sugar : basic::options::OptionKeys::motifs , motifs
flexbb_protocol : basic::options::OptionKeys::enzdes , enzdes
flexible_bb : basic::options::OptionKeys::mp::dock , mp::dock
flexible_bb_docking : basic::options::OptionKeys::docking , docking
flexible_bb_docking_interface_dist : basic::options::OptionKeys::docking , docking
flexible_chain : basic::options::OptionKeys::FloppyTail , FloppyTail
flexible_sc : basic::options::OptionKeys::mp::dock , mp::dock
flexible_start_resnum : basic::options::OptionKeys::FloppyTail , FloppyTail
flexible_stop_resnum : basic::options::OptionKeys::FloppyTail , FloppyTail
flexpack : basic::options::OptionKeys::flexpack , flexpack
flexpep_noprepack1 : basic::options::OptionKeys::flexPepDocking , flexPepDocking
flexpep_noprepack2 : basic::options::OptionKeys::flexPepDocking , flexPepDocking
flexpep_prepack : basic::options::OptionKeys::flexPepDocking , flexPepDocking
flexpep_score_only : basic::options::OptionKeys::flexPepDocking , flexPepDocking
flexPepDocking : basic::options::OptionKeys::flexPepDocking , flexPepDocking
flexPepDockingMinimizeOnly : basic::options::OptionKeys::flexPepDocking , flexPepDocking
flip_HNQ : basic::options::OptionKeys::packing , packing
float_of() : ObjexxFCL
floating_base : basic::options::OptionKeys::stepwise::rna , stepwise::rna
floating_base_anchor_res : basic::options::OptionKeys::stepwise::rna , stepwise::rna
floops() : ObjexxFCL
FloppyTail : basic::options::OptionKeys::FloppyTail , FloppyTail
flxbb : basic::options::OptionKeys::flxbb , flxbb
FMT_DISABLE_CONVERSION_TO_INT() : fmt::internal
fmt_real() : utility
FMT_SPECIALIZE_MAKE_UNSIGNED() : fmt::internal
Fnat : basic::options::OptionKeys::evaluation , evaluation
Fnonnat : basic::options::OptionKeys::evaluation , evaluation
fold_and_dock : basic::options::OptionKeys::fold_and_dock , fold_and_dock
fold_cst : basic::options::OptionKeys::fold_cst , fold_cst
fold_from_loops : basic::options::OptionKeys::fold_from_loops , fold_from_loops
fold_tree : basic::options::OptionKeys::in::file , demo::D030_Fold_tree , in::file
fold_tree_io : basic::options::OptionKeys::inout , inout
folding : demo::D060_Folding
folding_mover : demo::D060_Folding
foo() : utility
foo_all() : utility::py
foo_all_sp() : utility::py
Footer : make_templates
forbid_residues : basic::options::OptionKeys::willmatch , willmatch
force_anti_chi_res_list : basic::options::OptionKeys::full_model::rna , full_model::rna
force_apix : basic::options::OptionKeys::edensity , edensity
force_centroid_interaction : basic::options::OptionKeys::stepwise::rna , stepwise::rna
force_cutting_index : basic::options::OptionKeys::remodel::RemodelLoopMover , remodel::RemodelLoopMover
force_cutting_N : basic::options::OptionKeys::remodel::RemodelLoopMover , remodel::RemodelLoopMover
force_linear_fold_tree : basic::options::OptionKeys::FloppyTail , FloppyTail
force_minimize : basic::options::OptionKeys::fold_cst , fold_cst
force_mutate_framework_for_cluster() : antibody::design , basic::options::OptionKeys::antibody::design
force_native_topology : basic::options::OptionKeys::templates , templates
force_nonideal_structure : basic::options::OptionKeys::out::file , out::file
force_north_sugar_list : basic::options::OptionKeys::full_model::rna , full_model::rna
force_pdb_info_mapping : basic::options::OptionKeys::constraints , constraints
force_phosphate_instantiation : basic::options::OptionKeys::stepwise::rna , stepwise::rna
force_silent_bitflip_on_read : basic::options::OptionKeys::in::file , in::file
force_south_sugar_list : basic::options::OptionKeys::full_model::rna , full_model::rna
force_submotif_without_intervening_bulge : basic::options::OptionKeys::stepwise::monte_carlo , stepwise::monte_carlo
force_syn_chi_res_list : basic::options::OptionKeys::full_model::rna , full_model::rna
force_use_of_cluster_csts_with_outliers() : antibody , basic::options::OptionKeys::antibody
force_user_defined_jumps : basic::options::OptionKeys::stepwise::rna , stepwise::rna
forcePolyAAfragments : basic::options::OptionKeys::dwkulp , dwkulp
forest_file : basic::options::OptionKeys::constraints , constraints
format : BuildPackagedBindings , fmt
format_constr_type() : make_amb_constr
format_decimal() : fmt , fmt::internal
format_system_error() : fmt::internal
fprintf() : fmt
FPUtil : fmt::internal
fraction_by_recombination : basic::options::OptionKeys::ms , ms
frag3 : app::surface_docking::surface_docking , basic::options::OptionKeys::in::file , in::file
frag3_weight : basic::options::OptionKeys::flexPepDocking , flexPepDocking
frag5 : basic::options::OptionKeys::flexPepDocking , flexPepDocking
frag5_weight : basic::options::OptionKeys::flexPepDocking , flexPepDocking
frag9 : app::surface_docking::surface_docking , basic::options::OptionKeys::in::file , in::file
frag9_weight : basic::options::OptionKeys::flexPepDocking , flexPepDocking
frag_1mer_insertion_weight : basic::options::OptionKeys::cm::hybridize , cm::hybridize
frag_filename : demo::D080_Loop_modeling
frag_files : basic::options::OptionKeys::dna::specificity , basic::options::OptionKeys::in::file , basic::options::OptionKeys::loops , basic::options::OptionKeys::SSrbrelax , dna::specificity , in::file , loops , SSrbrelax
frag_length : demo::D080_Loop_modeling
frag_prefix : basic::options::OptionKeys::out::file , out::file
frag_res_files : basic::options::OptionKeys::smhybrid , smhybrid
frag_size : usec
frag_sizes : basic::options::OptionKeys::frags , basic::options::OptionKeys::loops , basic::options::OptionKeys::SSrbrelax , frags , loops , SSrbrelax
frag_weight_aligned : basic::options::OptionKeys::cm::hybridize , cm::hybridize
fragA : basic::options::OptionKeys::in::file , in::file
fragAlength : basic::options::OptionKeys::loodo , loodo
fragAnative : basic::options::OptionKeys::loodo , loodo
fragB : basic::options::OptionKeys::in::file , in::file
fragBlength : basic::options::OptionKeys::loodo , loodo
fragBnative : basic::options::OptionKeys::loodo , loodo
fragment_contacts : basic::options::OptionKeys::frags , frags
fragment_cycles : basic::options::OptionKeys::rigid , rigid
FRAGMENT_MOVER : basic
fragment_store : basic::options::OptionKeys::indexed_structure_store , indexed_structure_store
fragment_threshold_distance : basic::options::OptionKeys::indexed_structure_store , indexed_structure_store
FRAGMENTPICKING : basic
FRAGMENTPICKING_ATOMPAIR_SCORE : basic
FRAGMENTPICKING_CANDIDATES_COLLECTING : basic
FRAGMENTPICKING_CS_SCORE : basic
FRAGMENTPICKING_DIHEDRALCONSTR_SCORE : basic
FRAGMENTPICKING_PHIPSI_SCORE : basic
FRAGMENTPICKING_PROFILE_CAHING : basic
FRAGMENTPICKING_PROFILE_SCORE : basic
FRAGMENTPICKING_READ_VALL : basic
FRAGMENTPICKING_SECONDARY_SCORE : basic
fragments : basic::options::OptionKeys::in::path , in::path
fragpdb : basic::options::OptionKeys::lh::fragpdb , lh::fragpdb
frags : basic::options::OptionKeys::frags , frags
fragsample_patch : basic::options::OptionKeys::fast_loops , fast_loops
fragsample_score : basic::options::OptionKeys::fast_loops , fast_loops
fragset : test::Workshop4test
fragset3mer : loops , test::T400_Refinement
fragset9mer : test::T400_Refinement
fragsteal : basic::options::OptionKeys::templates::fragsteal , templates::fragsteal
FRAME : app::pyrosetta_toolkit::modules::prettytable::prettytable
frame() : numeric::kinematic_closure , numeric::kinematic_closure::radians
frame_rate : basic::options::OptionKeys::boinc , boinc
free : basic::options::OptionKeys::optE , optE
free_2HOprime_bonus : basic::options::OptionKeys::score , score
free_relax : basic::options::OptionKeys::remodel , remodel
free_side_chain_bonus : basic::options::OptionKeys::score , score
free_sugar_bonus : basic::options::OptionKeys::score , score
free_suite_bonus : basic::options::OptionKeys::score , score
frequency : amino_acids
frh_template() : antibody , basic::options::OptionKeys::antibody
frl_template() : antibody , basic::options::OptionKeys::antibody
from_degrees() : numeric::conversions
from_radians() : numeric::conversions
from_scratch_frequency : basic::options::OptionKeys::stepwise::monte_carlo , stepwise::monte_carlo
from_string() : utility
Fsol : basic::options::OptionKeys::patterson , patterson
Fstring::is_type< std::string >() : ObjexxFCL
Fstring::type_of< std::string >() : ObjexxFCL
Fstring_of() : ObjexxFCL
Fstring_of< std::string >() : ObjexxFCL
ft : test::T700_FoldTree , test::Workshop8test
full_cache_name() : basic::database
full_model : basic::options::OptionKeys::full_model , full_model
full_name() : basic::database
full_version : setup
fullatom : basic::options::OptionKeys::in::file , basic::options::OptionKeys::out::file , in::file , out::file
fullatom_sfx : basic::options::OptionKeys::ufv , ufv
fullatom_sfx_patch : basic::options::OptionKeys::ufv , ufv
fullscreen : basic::options::OptionKeys::boinc , boinc
FUNC : basic
FUNCTION : numeric::expression_parser
function_arguments() : binder
function_arguments_for_lambda() : binder
function_arguments_for_py_overload() : binder
function_pointer_type() : binder
function_qualified_name() : binder
FunctionTokenCOP : numeric::expression_parser
FunctionTokenOP : numeric::expression_parser
fxnal_group : basic::options::OptionKeys::hotspot , hotspot