Rosetta Protocols
2015.09
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Here is a list of all namespace members with links to the namespace documentation for each member:
- e -
E :
protocols::comparative_modeling::features
,
protocols::features
E_SS :
protocols::comparative_modeling::features
ec_funcs :
protocols::pack_daemon
ED :
protocols::simple_moves
EDGE_NGHBRS :
protocols::viewer
edges_within_interval() :
protocols::forge::methods
effective_lower_terminus_based_on_working_res() :
protocols::stepwise::modeler
effective_upper_terminus_based_on_working_res() :
protocols::stepwise::modeler
EFr :
protocols::fldsgn::topology
EllipsoidalRandomizationMoverCOP :
protocols::docking
EllipsoidalRandomizationMoverOP :
protocols::docking
EmbeddingCOP :
protocols::membrane::geometry
EmbeddingDefCOP :
protocols::membrane::geometry
EmbeddingDefOP :
protocols::membrane::geometry
EmbeddingOP :
protocols::membrane::geometry
emit_intermediate() :
protocols::nonlocal
,
protocols::star
empty_size_list :
protocols::frags
EMPTY_STRING() :
protocols::anchored_design
empty_string() :
protocols::viewer
enable_constraint_scoreterms() :
protocols::enzdes::enzutil
enable_sampling_of_loop_takeoff() :
protocols::stepwise::modeler::protein::loop_close
encode_alphanum() :
protocols::wum
END :
protocols::abinitio::abscript
END_ABINITIO :
protocols::abinitio
end_bias_probabilities() :
protocols::medal
END_BLOCK() :
protocols::jd2
end_of_effect_list :
protocols::generalized_kinematic_closure::perturber
end_of_filter_list :
protocols::generalized_kinematic_closure::filter
END_OF_MINIMIZATION :
protocols::optimize_weights
end_of_selector_list :
protocols::generalized_kinematic_closure::selector
EndPointSP :
protocols::wum2
EndToEndPivotsCOP :
protocols::kinematic_closure::pivot_pickers
EndToEndPivotsOP :
protocols::kinematic_closure::pivot_pickers
energy_evaluator :
protocols::simple_filters
energy_per_residue_filter_tracer() :
protocols::simple_filters
EnergyCutRotamerTrialsMinMoverCOP :
protocols::simple_moves
EnergyCutRotamerTrialsMinMoverOP :
protocols::simple_moves
EnergyCutRotamerTrialsMoverCOP :
protocols::simple_moves
EnergyCutRotamerTrialsMoverOP :
protocols::simple_moves
Enhanced_Chothia_Scheme :
protocols::antibody
EnsembleConstraints_SimpleCOP :
protocols::cluster
EnsembleConstraints_SimpleOP :
protocols::cluster
EnsembleConstraintsCOP :
protocols::cluster
EnsembleConstraintsOP :
protocols::cluster
ensure_directory_for_out_silent_file_exists() :
protocols::stepwise::legacy::modeler::rna
ensure_phosphate_nomenclature_matches_mini() :
protocols::farna
ensure_valid_full_seq_num() :
protocols::stepwise::modeler::rna
entity_elements_from_1letterstring() :
protocols::multistate_design
EntityCOP :
protocols::genetic_algorithm
EntityCorrespondenceCOP :
protocols::pack_daemon
EntityCorrespondenceOP :
protocols::pack_daemon
EntityElementCOP :
protocols::genetic_algorithm
EntityElementCreatorCOP :
protocols::genetic_algorithm
EntityElementCreatorOP :
protocols::genetic_algorithm
EntityElementOP :
protocols::genetic_algorithm
EntityElements :
protocols::genetic_algorithm
EntityFuncCOP :
protocols::pack_daemon
EntityFuncOP :
protocols::pack_daemon
EntityOP :
protocols::genetic_algorithm
EntityRandomizerCOP :
protocols::genetic_algorithm
EntityRandomizerOP :
protocols::genetic_algorithm
Enum :
protocols::forge::build::BuildInstructionState
,
protocols::forge::build::SegmentInsertConnectionScheme
,
protocols::forge::components::VLB_VallMemoryUsage
,
protocols::jd2::JobInputterInputSource
EnvClaimAP :
protocols::environment::claims
EnvClaimBrokerAP :
protocols::environment
EnvClaimBrokerCAP :
protocols::environment
EnvClaimBrokerCOP :
protocols::environment
EnvClaimBrokerOP :
protocols::environment
EnvClaimCAP :
protocols::environment::claims
EnvClaimCOP :
protocols::environment::claims
EnvClaimOP :
protocols::environment::claims
EnvClaims :
protocols::environment::claims
EnvironmentAP :
protocols::environment
EnvironmentCAP :
protocols::environment
EnvironmentCOP :
protocols::environment
EnvironmentOP :
protocols::environment
EnvLabelSelectorCOP :
protocols::environment::claims
EnvLabelSelectorOP :
protocols::environment::claims
EnvMoverCOP :
protocols::environment
EnvMoverOP :
protocols::environment
EnzConstraintIOAP :
protocols::toolbox::match_enzdes_util
EnzConstraintIOCAP :
protocols::toolbox::match_enzdes_util
EnzConstraintIOCOP :
protocols::toolbox::match_enzdes_util
EnzConstraintIOOP :
protocols::toolbox::match_enzdes_util
EnzConstraintParametersCAP :
protocols::toolbox::match_enzdes_util
EnzConstraintParametersCOP :
protocols::toolbox::match_enzdes_util
EnzConstraintParametersOP :
protocols::toolbox::match_enzdes_util
EnzCstTemplateResAtomsCOP :
protocols::toolbox::match_enzdes_util
EnzCstTemplateResAtomsOP :
protocols::toolbox::match_enzdes_util
EnzCstTemplateResCacheCOP :
protocols::toolbox::match_enzdes_util
EnzCstTemplateResCacheOP :
protocols::toolbox::match_enzdes_util
EnzCstTemplateResCOP :
protocols::toolbox::match_enzdes_util
EnzCstTemplateResOP :
protocols::toolbox::match_enzdes_util
EnzdesBaseProtocolAP :
protocols::enzdes
EnzdesBaseProtocolCAP :
protocols::enzdes
EnzdesBaseProtocolCOP :
protocols::enzdes
EnzdesBaseProtocolOP :
protocols::enzdes
EnzdesCacheableObserverAP :
protocols::toolbox::match_enzdes_util
EnzdesCacheableObserverCAP :
protocols::toolbox::match_enzdes_util
EnzdesCacheableObserverCOP :
protocols::toolbox::match_enzdes_util
EnzdesCacheableObserverOP :
protocols::toolbox::match_enzdes_util
EnzdesCstCacheCOP :
protocols::toolbox::match_enzdes_util
EnzdesCstCacheOP :
protocols::toolbox::match_enzdes_util
EnzdesCstParamCacheCOP :
protocols::toolbox::match_enzdes_util
EnzdesCstParamCacheOP :
protocols::toolbox::match_enzdes_util
EnzdesFixBBProtocolOP :
protocols::enzdes
EnzdesFlexBBProtocolAP :
protocols::enzdes
EnzdesFlexBBProtocolCAP :
protocols::enzdes
EnzdesFlexBBProtocolCOP :
protocols::enzdes
EnzdesFlexBBProtocolOP :
protocols::enzdes
EnzdesFlexibleRegionCOP :
protocols::enzdes
EnzdesFlexibleRegionOP :
protocols::enzdes
EnzdesJobInputterCOP :
protocols::enzdes
EnzdesJobInputterOP :
protocols::enzdes
EnzdesJobOutputterOP :
protocols::enzdes
EnzdesLoopInfoCOP :
protocols::toolbox::match_enzdes_util
EnzdesLoopInfoOP :
protocols::toolbox::match_enzdes_util
EnzdesLoopsFileCOP :
protocols::toolbox::match_enzdes_util
EnzdesLoopsFileOP :
protocols::toolbox::match_enzdes_util
EnzdesScorefileFilterCOP :
protocols::enzdes
EnzdesScorefileFilterOP :
protocols::enzdes
EnzdesSeqRecoveryCacheCOP :
protocols::toolbox::match_enzdes_util
EnzdesSeqRecoveryCacheOP :
protocols::toolbox::match_enzdes_util
EnzRepackMinimizeOP :
protocols::enzdes
eq_OP_deref() :
protocols::genetic_algorithm
error_message :
protocols::pack_daemon
ERROR_PREFIX :
protocols::medal
,
protocols::star
ET_BEST_CYCLIC :
protocols::analysis
ET_BEST_LINEAR :
protocols::analysis
ET_GENERAL :
protocols::analysis
EulerAnglesCOP :
protocols::stepwise::sampler::rigid_body
EulerAnglesOP :
protocols::stepwise::sampler::rigid_body
EVAL_DFUNC :
protocols::optimize_weights
EVAL_FUNC :
protocols::optimize_weights
evaluate_entity :
protocols::pack_daemon
evaluate_pose() :
protocols::evaluation
EvaluatedTrialMoverOP :
protocols::simple_filters
EvaluatorCreatorCOP :
protocols::evaluation
EvaluatorCreatorOP :
protocols::evaluation
EXCLUSIVE :
protocols::environment::claims
Exclusive :
protocols::features::RelevantResiduesMode
ExpExpressionCOP :
protocols::pack_daemon
ExpExpressionOP :
protocols::pack_daemon
exponential :
protocols::canonical_sampling
export_packer_results() :
protocols::farna
ExposedHydrophobicsFilterAP :
protocols::denovo_design::filters
ExposedHydrophobicsFilterCAP :
protocols::denovo_design::filters
ExposedHydrophobicsFilterCOP :
protocols::denovo_design::filters
ExposedHydrophobicsFilterOP :
protocols::denovo_design::filters
EXT_OMG :
protocols::loops
,
protocols::star
EXT_PHI :
protocols::loops
,
protocols::star
EXT_PSI :
protocols::loops
,
protocols::star
extend :
protocols::loops
extend_sequence_mapping() :
protocols::loops
Extended :
protocols::antibody
ExtendedPoseMoverCOP :
protocols::simple_moves
ExtendedPoseMoverOP :
protocols::simple_moves
ExtendFailure :
protocols::loops::loop_mover
ExternalGeomSamplerCOP :
protocols::toolbox::match_enzdes_util
ExternalGeomSamplerOP :
protocols::toolbox::match_enzdes_util
ExternalTransform :
protocols::toolbox::match_enzdes_util
extra_suite_atoms_lower :
protocols::stepwise::modeler::align
extra_suite_atoms_upper :
protocols::stepwise::modeler::align
extract_continuous_chunks() :
protocols::loops
extract_sample_weights() :
protocols::loophash
extract_secondary_structure_chunks() :
protocols::loops
ExtractAsymmetricPoseMoverCOP :
protocols::simple_moves::symmetry
ExtractAsymmetricPoseMoverOP :
protocols::simple_moves::symmetry
ExtractAsymmetricUnitMoverCOP :
protocols::simple_moves::symmetry
ExtractAsymmetricUnitMoverOP :
protocols::simple_moves::symmetry
ExtractSmallest() :
protocols::toolbox
ExtractSubposeMoverCOP :
protocols::matdes
ExtractSubposeMoverOP :
protocols::matdes
extras :
protocols::loops
ExtraScoreVector :
protocols::frag_picker
Generated on Sun Mar 1 2015 11:52:30 for Rosetta Protocols by
1.8.7